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NeuroPoly Lab Manual

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Ressources

  • 👋 Onboarding
    • Getting Started
    • Campus Access
    • Infrastructure
    • Google Drive
    • Computer Setup
      • 📧 Email
      • 🗣 Slack
      • 📶 Eduroam
      • 💻 Shell Profile
      • 💡 Other configuration tips
    • Software development
    • Consultants and RA
    • Postdoctoral fellows
  • 📅 Calendar & Meetings
  • 🖥 Computing Resources
    • 🖥 Computers @NeuroPoly
      • CPU Clusters
      • GPU Clusters
    • 🖥 Computers @CRIUGM
    • 🖥 Compute Canada
    • 🖨 Printer
    • ☁️ Microsoft 365
    • YouTube Procedure
  • 💾 Data
    • Dataset curation
    • data
    • duke
    • django
  • 🧲 MRI Scanning
    • UNF (3T Prisma)
    • MNI/McGill (7T Terra)
    • MHI (7T Agilent)
  • 🔧 RF Lab
    • NeuroPoly Coils
    • Misc
    • Phantoms
    • 3D Printing
    • OctoPrint
    • PCB Manufacturing
    • CNC machine

Academic Life

  • 🎓 University Courses
  • 📖 Comprehensive Exam
  • 💰 Scholarships
  • ✈️ Conferences
  • 📚 Bibliography
    • Theses
    • Spinal Cord Injury
    • MRI
    • MRI Analysis
    • Deep Learning
    • Histology
    • Paperpile Folder
  • 💡 Ideas for Cool Projects
  • ✍️ Academic Writing

Miscellaneous

  • 📎 Practical Information
    • 🌎 VISAs and Work Permits
    • 🏥 Medical
    • 🇨🇦 Living in Montreal
    • 🛠 Purchasing Supplies
  • 🤓 Geek tips
    • Useful links/Software
    • Bash/Shell
      • Script
    • Programming Languages
      • Python
      • MATLAB
      • C++
        • Installation of VTK and ITK on Mac OS X
        • Using XCode
    • Git & Github
    • git-annex
    • OS Guides
      • Linux
      • MacOSX
    • Various Software & Tools
      • Virtual Machines
        • VirtualBox
        • Vagrant
      • BitBucket
      • Docker
        • Docker for Deep Learning
      • Dropbox
      • Jekyll
      • Microsoft Word
      • OpenNeuro
      • Sketchup
      • XQuartz
    • Image Processing Software
      • Advanced Normalization Tools (ANTs)
      • Anima
      • Diffusion Simulator
      • FreeSurfer
      • FSL
        • FSLeyes
      • ITK-SNAP
      • NIfTI
      • OpenNeuro CLI
      • OsiriX
    • Deep Learning
      • CUDA
      • Tensorflow
      • Conditional Random Fields (CRF)
      • Restricted Boltzmann Machines (RBM)
      • Misc
  • 🧩 EDI
  • 📞 Contact
  • NeuroPoly Website

NIfTI

NIfTI#

Fields: nipy/nibabel

qform/sform:

  • http://nifti.nimh.nih.gov/nifti-1/documentation/nifti1fields/nifti1fields_pages/qsform.html

  • http://fsl.fmrib.ox.ac.uk/fsl/fslwiki/Orientation%20Explained

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